Friday, 28 August 2026 @ 19:02 UTC~19314,283165,045

AlignCli

Snijderlab·Snijderlab.AlignCli

A command line interface for easily aligning sequences.

winget install --id Snijderlab.AlignCli --exact --source winget

Latest 0.4.2·August 4, 2026

Release Notes
  • Added --either-global
  • Added PAM30MS scoring matrix
  • Updated modification display with parents and children and updated cross IDs
  • Display accession number for IMGT entries
  • Added mass-based multiple sequence alignment, both when feeding a single PSM file and when given multiple sequences as arguments
  • Added CSV export
  • Added pair modes, which gives control over how modifications are scored

Installer type: portable

x64—39E76E4A34F8E2B11E8267EB6F2B8DBF17A02B16217568A4CDAF102B22F845B1

Details

Homepage
https://github.com/snijderlab/align-cli
License
Apache-2.0
Publisher
Snijderlab
Support
https://github.com/snijderlab/align-cli/issues

Tags

alignmentmass-spectrometryproteinrust

Older versions (2)

0.4.1
x64—9F5F4B07BD9F4516A502EC610AABE7E8E9FA01772B2FAD77FDA14ED5CF3427C5
0.4.0
x64—718568CF93BDD1275767E837E9BAF2257A4D5BEE405C1D591673DB414980C2A1